species:   Artha
pid:       MI0000984
parent:    ath-MIR169j
paralog:   
locus:     3:9872333-9872553
matures:   ['UAGCCAAGGAUGACUUGCCUG', 'GGCAGUCUCCUUGGCUAUCU']
srr:       SRR9216053
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216053.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216053.cram 3:9872333-9872553

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

                                                ***********************                                                                                                          **********************                      
GAGUAUAAUGAGGAAGAGAGGUCUAACAUGGCGAAAAGAGUCAUGUUUAGUAGCCAAGGAUGACUUGCCUGAUCUUUUUCACCUCCAUGAUUCAAUUUGUAAUUCAUGGGUUUUGGAUUAUUAUACAUUCAAAAGUAUAAUAAUUUGAAAUCAUGUUGAAUCUUGCGGGUUAGGUUUCAGGCAGUCUCCUUGGCUAUCUUGACAUGCUUUUUUCAUUCACG
....................(((......)))((((((((.((((((.((((((((((((.((((.((((((....(((.((((.((.((((((((............((((((((((((((((((........))))))))))))))))))..)))))))).)).)))).)))..)))))))))))))))))))).)).)))))))))))))).......
--------------------------------------------------UAGCCAAGGAUGACUUGCCUG------------------------------------------------------------------------------------------------------------------------------------------------------ l=21 a=0 c
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGUCUCCUUGGCUAUCU---------------------- l=20 a=0 c*
--------------------------------------------------UAGCCAAGGAUGACUUGCCUG------------------------------------------------------------------------------------------------------------------------------------------------------ l=21 a=0 ma
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGUCUCCUUGGCUAUCU---------------------- l=20 a=0 ma*


No alignments to locus

mb-01011
ax-1011011
ku-01
ss-000110011100
fn-001
